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The wheat pathogen Stagonospora nodorum, causal organism of the wheat disease Stagonospora nodorum blotch, has emerged as a model for the Dothideomycetes, a large fungal taxon that includes many important plant pathogens. The initial annotation of the genome assembly included 16 586 nuclear gene models. These gene models were used to design a microarray that has been interrogated with labelled tra
The timing of biological events (phenology) is an important aspect of both a species' life cycle and how it interacts with other species and its environment. Patterns of phenological change have been given much scientific attention, particularly recently in relation to climate change. For pairs of interacting species, if their rates of phenological change differ, then this may lead to asynchrony b
In this study, design of low-order feedforward controllers from both reference signal and measurable disturbance for proportional–integral–derivative (PID) controllers is considered. The feedforward controllers from reference are equivalent to the use of a PID controller with set-point weighting. The design problem is formulated as a convex optimisation problem and then solved for a batch of proce
Arbuscular mycorrhizal fungi (AMF) are plant symbionts capable of enhancing nutrient uptake and improving soil structure. These features have brought AMF into focus as a component of soil restoration practices in ecosystems with degraded or highly eroded soils. It has been suggested that increasing the levels of organic material in the soil will enhance the production of AMF biomass, and that orga
The phylogenetic structure and community composition were analysed in an existing data set of marine bacterioplankton communities to elucidate the evolutionary and ecological processes dictating the assembly. The communities were sampled from coastal waters at nine locations distributed worldwide and were examined through the use of comprehensive clone libraries of 16S ribosomal RNA genes. The ana
The effect of grazing by large herbivores on the microbial community and the ecosystem functions they provide are relatively unknown in grassland systems. In this study, the impact of grazing upon the size, composition and activity of the soil microbial community was measured in field experiments in two coastal ecosystems: one salt marsh and one sand dune grassland. Bacterial, fungal and total mic
This paper analyzes the relationship between three dimensions (economic, social, and political) of globalization and life expectancy using a panel of 92 countries covering the 1970–2005 period. Using different estimation techniques and sample groupings, we find that economic globalization has a robust positive effect on life expectancy, even when controlling for income, nutritional intake, literac
Lifestyle interventions (i.e., diet and/or physical activity) are effective in delaying or preventing the onset of diabetes and cardiovascular disease. However, policymakers must know the cost-effectiveness of such interventions before implementing them at the large-scale population level. This review discusses various issues (e.g., characteristics, modeling, and long-term effectiveness) in the ec
Fluctuations in soil moisture create drying-rewetting events affecting the activity of microorganisms. Microbial responses to drying-rewetting are mostly studied in soils that are air-dried before rewetting. Upon rewetting, two patterns of bacterial growth have been observed. In the Type 1 pattern, bacterial growth rates increase immediately in a linear fashion. In the Type 2 pattern, bacterial gr
The identification of causal links between microbial community structure and ecosystem functions are required for a mechanistic understanding of ecosystem responses to environmental change. One of the most influential factors affecting plants and microbial communities in soil in managed ecosystems is the current land-use. In forestry, wood ash has been proposed as a liming agent and a fertilizer,
Many separate-sexed organisms have sex chromosomes controlling sex determination. Sex chromosomes often have reduced recombination, specialized (frequently sex-specific) gene content, dosage compensation and heteromorphic size. Research on sex determination and sex chromosome evolution has increased over the past decade and is today a very active field. However, some areas within the field have no
BACKGROUND: The explosion in biological information creates the need for databases that are easy to develop, easy to maintain and can be easily manipulated by annotators who are most likely to be biologists. However, deployment of scalable and extensible databases is not an easy task and generally requires substantial expertise in database development.RESULTS: BioBuilder is a Zope-based software t
Let B be a locally integrable matrix function, W a matrix Ap weight with 1
We present the implementation of a platform for providing mobility and reliability to computational tasks that are executed in the access cloud. The platform is primarily aimed at providing an experimental tool for further studying of sophisticated techniques for task scheduling, placement and migration policies. In its current form, the platform supports streaming services but can be extended wit
Mineral weathering plays an important role in soil formation, long-term plant nutrition, and the global carbon cycle. The dissolution rate of most soil minerals is extremely slow. Nearly 100. years ago it was proposed that plants actively mine for nutrients locked in soil minerals. In more recent times the role of plant-associated mycorrhizal fungi has been emphasized. In this chapter we criticall
Cereal grasses of the Triticeae tribe have been the major food source in temperate regions since the dawn of agriculture. Their large genomes are characterized by a high content of repetitive elements and large pericentromeric regions that are virtually devoid of meiotic recombination. Here we present a high-quality reference genome assembly for barley (Hordeum vulgare L.). We use chromosome confo
Polyporales is strongly supported as a clade of Agaricomycetes, but the lack of a consensus higher-level classification within the group is a barrier to further taxonomic revision. We amplified nrLSU, nrITS, and rpb1 genes across the Polyporales, with a special focus on the latter. We combined the new sequences with molecular data generated during the PolyPEET project and performed Maximum Likelih
